Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953397.1_cds_XP_016492566.1_82763
CDS Infomation

[gene=LOC107812050] [db_xref=GeneID:107812050] [protein=pleiotropic drug resistance protein 3] [exception=annotated by transcript or proteomic data] [protein_id=XP_016492566.1] [location=join(182261..182646,182851..182974,183463..183548,184435..184519,185186..185345,185429..185505,185714..185767,185858..185948,186073..186374,186460..>186617)] [gbkey=CDS]
Sequence

ATGGCTCAGTTGGTTGGTTCAGATGAAATAGAGTCATTTAGAATGGATCTCGCAGAGATT
GGAAGAAGCTTGAGATCATCATTTAGGGGCCAGTCTTCGAGTTTCAGGAGCAATTCAGCC
TTGAGTGCTTCTCAGAAGGACGACGCTGTAGATGAGGAGAACATGTTGGCCTGGGCAGCA
ATTGAGAGACTGCCAACATTTGATAGGTTGAGATCATCTCTCTTTGAGGAAATCAATGGC
AACGACGCCAATGTTAAGAGGAAAAGAGTAACTGATGTTACCAAGCTCGGAGCTCTAGAA
AGGCATGTTTTCATTGAAAAGATGATTAAGCACATTGAACATGACAACCTTCAATTGTTG
CACAAAATCAGAAAGAGAATTGACAAAGTTGGTGTAGAATTGCCTACAGTGGAAGTGAGA
TATAAAAATTTAACCATTGAAGCAGAATGTGAGCTAGTTCATGGAAAGCCTCTCCCTACA
CTTTGGAATTCTCTCAAAAGCATAACGATGAACCTTGCTAGGCTTCCAGGTCTACAGTCA
GAACTGGCCAAGATTAAAATCCTTAATGATGTCAGTGGTGTAATAAAACCTGGACGAATG
ACTCTATTGCTTGGACCTCCTGGATGCGGCAAAACATCACTACTGAAAGCACTTTCAGGA
AACCTGGACAAATCTCTTAAGGTTTCTGGGGAGATTTCTTACAATGGTTATAAATTGGAA
GAGTTTGTCCCACAGAAAACTTCTGCATATGTAAGCCAAAATGATCTACACATCCCTGAA
ATGACTGTTAGAGAAACACTAGATTATTCATCTCGTTTTCAAGGAGTAGGAAGCAGAGCA
GAGATTATGACTGACCTAAGCAGAAGGGAGAAAGAAGCAGGAGTTGTTCCTGATCCAGAT
ATAGACACTTACATGAAGGCGATATCTATTGAAGGACAAAAGAAAAACCTTCAGACGGAT
TATATTCTGAAGATTCTTGGACTTGATATTTGTGCTGACACATTGGTTGGTGATGCCATG
AGAAGAGGTATCTCGGGTGGTCAAAAGAAAAGACTGACAACAGGCGAGCTGATTGTTGGC
CCCATAAAAGCATTGTTTATGGATGAAATATCGAATGGCTTAGATAGCTCGACTACATAC
CAGATTGTTGCTTGCCTTCAGCAGCTGGCACATATTACAGATGCAACTATACTTGTGTCG
CTTCTTCAACCAGCACCAGAGACCTTTGATCTGTTTGATGATATAATCCTGATGGCTGAA
GGAAAAATTCTTTACCATGGGCCAAGAAATTCTGCTTTAGAATTTTTTGAAAGCTGTGGG
TTCAAATGTCCTGAAAGGAAAGGGGTGGCTGACTTCCTCCAGGAGGTTACATCGAAAAAA
GATCAAGCACAGTACTGGCATGGAACTAAAGAAACGTATAAATTTGTGTCAGTTGATATG
TTATCCAGAAAATTTAAGGAATCTCCTTACAGGAAAAAGCTGAATGAAGAACTTTCTGTT
CCATATGATAACTCCAGGAGTCA

Peptide Sequence

PEP ID

XP_016492566.1
PEP Infomation

PREDICTED: pleiotropic drug resistance protein 3 [Nicotiana tabacum]
Sequence

MAQLVGSDEIESFRMDLAEIGRSLRSSFRGQSSSFRSNSALSASQKDDAVDEENMLAWAA
IERLPTFDRLRSSLFEEINGNDANVKRKRVTDVTKLGALERHVFIEKMIKHIEHDNLQLL
HKIRKRIDKVGVELPTVEVRYKNLTIEAECELVHGKPLPTLWNSLKSITMNLARLPGLQS
ELAKIKILNDVSGVIKPGRMTLLLGPPGCGKTSLLKALSGNLDKSLKVSGEISYNGYKLE
EFVPQKTSAYVSQNDLHIPEMTVRETLDYSSRFQGVGSRAEIMTDLSRREKEAGVVPDPD
IDTYMKAISIEGQKKNLQTDYILKILGLDICADTLVGDAMRRGISGGQKKRLTTGELIVG
PIKALFMDEISNGLDSSTTYQIVACLQQLAHITDATILVSLLQPAPETFDLFDDIILMAE
GKILYHGPRNSALEFFESCGFKCPERKGVADFLQEVTSKKDQAQYWHGTKETYKFVSVDM
LSRKFKESPYRKKLNEELSVPYDNSRSHRNSITFRDYSLPKWELFRACMSREFLLMKRNS
FIYIFKTVQLAIIASITMTVFLRTRMDTDLVHANYYLGALFYALIILLVDGFPELSMTIT
RLAVFYKQSELCFYPAWAYTIPATILKIPLSLLESVIWASMTYYVIGFSPEAGRFFRQLL
LLFAVHMTSISMFRFLASVCRTIVASTAAGGLSILFVLCFSGFIIPRPSMPIWLKWGFWI
SPLTYGEIGLAVNEFLAPRWQKTLPTNTSIGNEVLESRGLNFDGYFYWISVCALFGFTIL
FNIGFTLALTFLKAPGSRAIISTDKYSQIEGSSDSIDKADAAENSKATMDSHERAGRMVL
PFEPLSLVFQDVQYYVDTPAAMTELGFTQKRLQLLSDITGALRPGILTALMGVSGAGKTT
LLDVLAGRKTTGYVEGEIKVGGYPKVQETFARVSGYCEQTDIHSPQITVEESVIFSAWLR
LHPQIDSKTKYEFVKEVIETIELDGIKGMLVGMPGVSGLSTEQRKRLTIAVELVANPSII
FMDEPTTGLDARSAAIVMRAVKNVADTGRTIVCTIHQPSIDIFEAFDELILLKTGGRMIY
WGHLGRNSCKMIEYFEGISCVPKIKNNHNPATWMLEVTSTSSEADISIDFAEVYKNSALH
KNNEELVKKLSFPPAGSKDLHFPTRFSQNGWGQFKTCFWKQYWSYWRSPSYNLMRSLHML
FASLVSGLLFWDKGKKLDNQQSVFSVFGAMFTAVIFCGINNSSSVLPYVTTERSVLYRER
FAGMYASWAYALAQVAIEIPYLLAQALAFTVITYPMIGYYWSAYKVFWYFYSMFCTLLYF
TYLGMMLVSMTPSFPVAAILQSSFYTMFNLFAGFLMPKAQIPKWWIWFYYLTPTSWTLNG
MLTSQYGDIEKEITVFQEKKTVAAFLGDYFGFHHNQLPIVAFVLIAYPLVFASLFAFFIG
KLNFQRR

Transcript Sequence

Gene sequence data has not been registered.